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  <titleInfo>
    <title>Bioinformatics</title>
    <subTitle>high performance parallel computer architectures</subTitle>
  </titleInfo>
  <name type="personal">
    <namePart>Schmidt, Bertil</namePart>
  </name>
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    <place>
      <placeTerm type="text">Boca Raton</placeTerm>
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    <publisher>CRC Press</publisher>
    <dateIssued>2010</dateIssued>
    <issuance>monographic</issuance>
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  <language>
    <languageTerm authority="iso639-2b" type="code">eng</languageTerm>
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    <extent>370 p.</extent>
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  <tableOfContents>Algorithms for bioinformatics / Bertil Schmidt -- Introduction to GPGPUs and massively-threaded programming / Rob Farber -- FPGA: architecture and programming / Douglas Maskell -- Parallel algorithms for alignments on the cell be / Abhinav Sarje, Srinivas Aluru -- Orchestrating the phylogenetic likelihood function on emerging parallel architectures / Alexandros Stamatakis -- Parallel bioinformatics algorithms for CUDA-enabled GPUs / Yongchao Liu, Bertil Schmidt, Douglas Maskell -- CUDA error correction method for high-throughput short-read sequencing data / Haixiang Shi, Weiguo Liu, Bertil Schmidt -- FPGA acceleration of seeded similarity search / Arpith Jacob, Joseph Lancaster, Jeremy Buhler, Roger Chamberlain -- Seed-based parallel protein sequence comparison combining multithreading, GPU and FPGA technologies / Dominique Lavenier, Van-Hoa Nguyen -- Database searching with profile hidden markov models on reconfigurable and many-core architectures / John Paul Walters, Vipin Chaudhary, Bertil Schmidt -- Cobacobana: a massively parallel FPGA-based computer architecture / Manfred Schimmler, Lars Wienbrandt, Tim G�uneysu, Jost Bissel -- Accelerating string set matching for bioinformatics using FPGA hardware / Yoginder S. Dandass -- Reconfigurable neural system and its application to dimeric protein binding site identification / Feng Lin, Maria Stepanova -- Parallel FPGA search engine for protein identification / Daniel Coca, Istvan Bogdan, RoBert J. Beynong</tableOfContents>
  <note type="statement of responsibility">edited by Bertil Schmidt.</note>
  <note>Includes bibliographical references and index.</note>
  <note>Also available in print edition</note>
  <note>Mode of access: World Wide Web</note>
  <subject>
    <topic>Bioinformatics</topic>
    <topic>Data processing</topic>
  </subject>
  <subject>
    <topic>Parallel processing (Electronic computers</topic>
  </subject>
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  <identifier type="isbn">9781439814895 (ebook : PDF)</identifier>
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